ISL Colloquium

Topic: 
Representation theoretic patterns in three dimensional cryo-electron microscopy
Thursday, October 20, 2016 - 4:15pm to 5:15pm
Venue: 
Packard 101
Speaker: 
Ronny Hadani (UTexas at Austin)
Abstract / Description: 

Three dimensional cryo-electron microscopy (3D cryo-EM, for short) is the problem of determining the three dimensional structure of a large molecule from the set of images, taken by an electron microscope, of randomly oriented and positioned identical molecular particles which are frozen in a thin layer of ice. A solution to this problem is of particular interest, since it promises to be an entirely general technique which does not require crystallization or other special preparation stages. Present approaches to the problem fail with particles that are too small, cryo-EM images that are too noisy or at resolutions where the signal-to-noise ratio becomes too small.

The focus of my talk is the intrinsic reconstitution algorithm, due to Singer and Shkolnisky, which constitutes a basic step for the solution of the 3D cryo-EM problem and whose main appealing property is its remarkable numerical stability to noise. My goal is to give an introductory explanation of the mathematical principles underlying this novel algorithmic approach, while hinting about how they apply to other fundamental problems in cryo-EM and beyond. Along the way, I will describe the mathematical model underlying the experimental set-up, specifying the main computational problems/technical difficulties that should be resolved as part of three dimensional structure determination from cryo-EM images.

Finally, to put things in a broader mathematical perspective, I will briefly mention the general picture: explaining how other fundamental algorithmic problems of Cryo-EM (and beyond) can be formulated and effectively solved in similar mathematical framework.

Bio:

Ronny Hadani is an associate professor in the math department at University of Texas at Austin. Before that he was a L.E Dickson postoctoral fellow at University of Chicago. He did his PhD in pure mathematics at Tel-Aviv University under the supervision of Prof. Joseph Bernstein. He did his Master degree in computer science at the Weizmann Institute of Science. His field of expertise is representation theory and harmonic analysis with applications to signal processing, communication and computational science.